STRINGSTRING
NGR_c20410 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c20410" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c20410annotation not available (678 aa)    
Predicted Functional Partners:
NGR_c20400
annotation not available (209 aa)
 
     
  0.923
NGR_c20420
annotation not available (201 aa)
 
          0.852
NGR_c20440
annotation not available (310 aa)
   
 
  0.849
NGR_c20430
annotation not available (248 aa)
   
      0.841
lcdH
L-carnitine dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3-dehydrocarnitine (534 aa)
 
   
  0.784
trxB3
annotation not available (324 aa)
   
 
  0.782
NGR_c20390
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline (274 aa)
 
   
  0.745
NGR_c04860
annotation not available (416 aa)
 
   
  0.744
NGR_c26320
annotation not available (415 aa)
 
   
  0.730
NGR_c26080
annotation not available (710 aa)
   
   
  0.727
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
Server load: low (9%) [HD]