STRINGSTRING
NGR_c20800 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c20800" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c20800annotation not available (458 aa)    
Predicted Functional Partners:
NGR_c24200
annotation not available (784 aa)
 
 
  0.838
NGR_c04060
annotation not available (928 aa)
 
 
  0.837
NGR_c07040
annotation not available (598 aa)
 
  0.691
NGR_c23200
annotation not available (788 aa)
 
 
0.666
NGR_c29670
annotation not available (888 aa)
 
 
 
0.654
NGR_c20810
annotation not available (166 aa)
              0.629
NGR_c20790
annotation not available (236 aa)
 
          0.623
NGR_c34460
annotation not available (917 aa)
 
 
  0.535
NGR_c04750
annotation not available (903 aa)
 
 
0.533
NGR_c04310
annotation not available (446 aa)
 
 
0.532
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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