STRINGSTRING
NGR_c21410 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c21410" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c21410annotation not available (429 aa)    
Predicted Functional Partners:
soxA1
annotation not available (997 aa)
 
 
  0.678
soxA2
annotation not available (987 aa)
 
 
  0.678
glnA1
annotation not available (478 aa)
 
   
  0.584
soxD1
annotation not available (113 aa)
     
      0.516
soxD2
annotation not available (92 aa)
     
      0.516
NGR_c21400
annotation not available (479 aa)
              0.498
NGR_c20410
annotation not available (678 aa)
   
 
  0.475
NGR_c32950
annotation not available (510 aa)
 
   
  0.459
NGR_c32980
annotation not available (445 aa)
 
     
  0.445
NGR_c29160
annotation not available (251 aa)
 
   
  0.420
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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