STRINGSTRING
NGR_c21430 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c21430" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c21430annotation not available (381 aa)    
Predicted Functional Partners:
NGR_c21440
annotation not available (461 aa)
   
  0.923
glnA2
annotation not available (454 aa)
 
     
  0.662
NGR_c27350
annotation not available (348 aa)
   
 
  0.598
NGR_c26770
annotation not available (342 aa)
   
 
  0.598
NGR_c25690
Alcohol dehydrogenase; Zn containing; adh-3 (371 aa)
   
 
  0.598
NGR_c07250
annotation not available (346 aa)
   
 
  0.598
NGR_c03790
annotation not available (360 aa)
   
 
  0.598
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (480 aa)
       
 
  0.572
ppdK
annotation not available (896 aa)
   
   
  0.552
adhC5
Glutathione-dependent formaldehyde dehydrogenase; FDH; FALDH; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily (375 aa)
   
 
  0.544
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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