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NGR_c21570 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c21570" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c21570annotation not available (300 aa)    
Predicted Functional Partners:
lcdH
L-carnitine dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3-dehydrocarnitine (534 aa)
 
   
  0.943
NGR_c21600
annotation not available (699 aa)
 
          0.814
NGR_c21590
annotation not available (475 aa)
 
          0.807
NGR_c21560
annotation not available (323 aa)
 
     
  0.729
NGR_c21620
annotation not available (529 aa)
 
          0.677
NGR_c21610
annotation not available (260 aa)
 
          0.652
NGR_c21660
annotation not available (665 aa)
 
          0.611
NGR_c21640
annotation not available (275 aa)
 
          0.429
NGR_c21630
annotation not available (370 aa)
 
          0.410
NGR_c21650
annotation not available (543 aa)
 
          0.404
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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