STRINGSTRING
NGR_c22000 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c22000" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c22000annotation not available (122 aa)    
Predicted Functional Partners:
cya4
annotation not available (584 aa)
              0.687
NGR_c21980
annotation not available (71 aa)
              0.633
NGR_c27090
annotation not available (254 aa)
   
          0.619
NGR_c21970
annotation not available (393 aa)
         
  0.571
spsB
Putative kinase Y4dM; y4dM; NGR234_66; Belongs to the HipA Ser/Thr kinase family (409 aa)
     
 
  0.559
spsD
Putative kinase Y4mE; y4mE; NGR234_236; Belongs to the HipA Ser/Thr kinase family (420 aa)
     
 
  0.559
NGR_c04120
annotation not available (282 aa)
   
          0.556
NGR_c22870
annotation not available (460 aa)
   
     
  0.549
atpF2
ATP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family (203 aa)
   
          0.502
NGR_c31420
annotation not available (182 aa)
   
          0.475
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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