STRINGSTRING
NGR_c22560 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c22560" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c22560annotation not available (807 aa)    
Predicted Functional Partners:
NGR_c22550
annotation not available (317 aa)
         
  0.860
NGR_c22570
annotation not available (265 aa)
              0.845
NGR_c22540
annotation not available (721 aa)
              0.845
NGR_c22530
annotation not available (134 aa)
              0.757
NGR_c22430
annotation not available (212 aa)
   
          0.750
NGR_c01380
annotation not available (1018 aa)
   
        0.711
NGR_c22580
annotation not available (49 aa)
              0.618
NGR_c19570
annotation not available (218 aa)
 
     
  0.538
NGR_a02880
Uncharacterized protein y4kH; y4kH; NGR234_194 (127 aa)
   
          0.486
NGR_a00190
Uncharacterized protein y4bK; y4bK; NGR234_31 (222 aa)
   
          0.426
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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