STRINGSTRING
NGR_c22660 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c22660" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c22660annotation not available (97 aa)    
Predicted Functional Partners:
NGR_c25560
annotation not available (118 aa)
 
     
  0.660
NGR_c24330
annotation not available (479 aa)
   
          0.629
NGR_c04100
annotation not available (275 aa)
   
     
  0.624
cya3
annotation not available (500 aa)
   
          0.580
NGR_c00900
annotation not available (156 aa)
 
          0.512
cya2
annotation not available (230 aa)
   
          0.416
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (684 aa)
              0.414
NGR_c17220
annotation not available (241 aa)
   
     
  0.403
NGR_c06970
annotation not available (128 aa)
   
          0.403
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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