STRINGSTRING
NGR_c23520 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c23520" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c23520annotation not available (747 aa)    
Predicted Functional Partners:
NGR_c24550
annotation not available (306 aa)
 
 
  0.910
NGR_c19370
annotation not available (374 aa)
   
          0.773
NGR_c24580
annotation not available (315 aa)
 
   
  0.748
NGR_c19390
annotation not available (165 aa)
   
     
  0.737
NGR_c24570
annotation not available (433 aa)
 
   
  0.682
hmuV
Hemin import ATP-binding protein HmuV; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system (262 aa)
 
   
  0.673
NGR_c36240
annotation not available (455 aa)
   
     
  0.663
NGR_c27740
annotation not available (254 aa)
   
     
  0.650
NGR_c13660
annotation not available (972 aa)
   
 
 
  0.626
NGR_c24590
annotation not available (373 aa)
 
   
  0.613
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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