STRINGSTRING
NGR_c23590 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c23590" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c23590annotation not available (637 aa)    
Predicted Functional Partners:
NGR_c23600
annotation not available (382 aa)
 
          0.968
NGR_c23580
annotation not available (429 aa)
 
          0.965
NGR_c23610
annotation not available (362 aa)
 
          0.944
NGR_c23570
annotation not available (406 aa)
 
          0.842
NGR_c00670
annotation not available (118 aa)
   
          0.698
NGR_c09250
annotation not available (147 aa)
   
          0.639
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1401 aa)
     
 
  0.619
fhs
annotation not available (559 aa)
   
        0.580
NGR_c18660
annotation not available (162 aa)
   
          0.577
NGR_c08160
annotation not available (46 aa)
 
          0.557
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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