STRINGSTRING
smoS protein (Sinorhizobium fredii NGR234) - STRING interaction network
"smoS" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smoSannotation not available (257 aa)    
Predicted Functional Partners:
NGR_c24690
annotation not available (494 aa)
   
  0.950
NGR_c24720
annotation not available (276 aa)
 
        0.934
NGR_c24730
annotation not available (290 aa)
 
        0.932
NGR_c24710
annotation not available (333 aa)
         
  0.930
NGR_c24740
annotation not available (436 aa)
 
          0.805
NGR_c24680
annotation not available (222 aa)
     
      0.762
tdh
L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family (345 aa)
 
 
  0.614
araB
annotation not available (527 aa)
              0.556
NGR_c08930
3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (423 aa)
 
 
  0.500
xylB
annotation not available (484 aa)
 
     
  0.464
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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