STRINGSTRING
NGR_c25470 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c25470" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c25470annotation not available (420 aa)    
Predicted Functional Partners:
NGR_c25490
annotation not available (277 aa)
 
 
  0.937
NGR_c25480
annotation not available (311 aa)
 
 
  0.928
NGR_c25450
annotation not available (238 aa)
 
          0.900
mdeA
annotation not available (390 aa)
 
          0.804
NGR_c25500
annotation not available (355 aa)
 
 
  0.761
NGR_c22210
annotation not available (667 aa)
 
     
  0.581
NGR_c25440
annotation not available (461 aa)
              0.472
NGR_c35270
annotation not available (279 aa)
 
 
  0.466
NGR_a02180
Probable ABC transporter permease protein y4oR; Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane (277 aa)
 
 
  0.466
NGR_c32590
annotation not available (159 aa)
   
          0.430
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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