STRINGSTRING
paaB1 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"paaB1" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaB1annotation not available (263 aa)    
Predicted Functional Partners:
paaN
annotation not available (685 aa)
 
  0.973
NGR_c26080
annotation not available (710 aa)
 
 
0.971
paaJ
annotation not available (173 aa)
 
 
  0.971
NGR_c21590
annotation not available (475 aa)
 
  0.966
NGR_c37150
annotation not available (257 aa)
 
0.966
paaI
annotation not available (261 aa)
 
 
  0.965
paaB2
annotation not available (94 aa)
 
 
  0.965
paaG
annotation not available (334 aa)
 
 
  0.962
paaD
annotation not available (156 aa)
 
 
  0.949
NGR_c04900
annotation not available (593 aa)
 
  0.949
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
Server load: low (14%) [HD]