STRINGSTRING
NGR_c27160 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c27160" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c27160annotation not available (334 aa)    
Predicted Functional Partners:
cobT
annotation not available (630 aa)
              0.667
cobS
annotation not available (331 aa)
              0.620
NGR_c07600
annotation not available (143 aa)
   
          0.602
NGR_c26870
annotation not available (67 aa)
   
          0.593
NGR_c10670
annotation not available (89 aa)
   
          0.577
NGR_c10170
annotation not available (110 aa)
   
          0.558
NGR_c27190
annotation not available (212 aa)
              0.535
NGR_c08090
annotation not available (88 aa)
   
          0.527
NGR_c03360
Uncharacterized protein; Similar to phasin 2 (148 aa)
   
          0.504
NGR_c00360
annotation not available (171 aa)
   
          0.481
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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