STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cobSAerobic cobaltochelatase, CobS subunit. (331 aa)    
Predicted Functional Partners:
cobT
Aerobic cobaltochelatase, CobT subunit.
 
 
 0.994
cobN
Hydrogenobyrinicacid a,c-diamide cobaltochelatase cobN subunit.
     
 0.916
cobB
Cobyrinic acid A,C-diamide synthase CobB; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
     
 0.901
ACP25291.1
Putative flavoprotein oxidoreductase.
     
  0.900
cobO
cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.
     
  0.900
ACP26437.1
Putative ATP cob(I)alamin adenosyltransferase, monofunctional PduO type; Belongs to the Cob(I)alamin adenosyltransferase family.
     
  0.900
norD
NorD protein required for nitric oxide reductase (Nor) activity.
  
  
 0.710
norC
Nitric-oxide reductase subunit C.
  
  
 0.678
norB
Nitric-oxide reductase subunit B; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.641
ACP26468.1
Putative DNAJ chaperone family protein.
       0.616
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.