STRINGSTRING
NGR_c27200 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c27200" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c27200annotation not available (93 aa)    
Predicted Functional Partners:
NGR_c16290
annotation not available (111 aa)
 
 
  0.759
NGR_c27190
annotation not available (212 aa)
              0.688
cobS
annotation not available (331 aa)
              0.582
cobT
annotation not available (630 aa)
              0.548
nudH
RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5’-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage (175 aa)
   
      0.507
NGR_c12920
annotation not available (149 aa)
   
        0.501
NGR_c27160
annotation not available (334 aa)
              0.468
NGR_c26660
Putative SAM-dependent methyltransferase protein; Similar to BioC (315 aa)
   
 
      0.417
NGR_c28000
annotation not available (193 aa)
     
 
  0.400
NGR_c08710
annotation not available (630 aa)
   
   
  0.400
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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