STRINGSTRING
NGR_c27480 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c27480" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c27480annotation not available (192 aa)    
Predicted Functional Partners:
NGR_c18870
annotation not available (403 aa)
   
          0.756
NGR_c18900
annotation not available (453 aa)
   
          0.747
NGR_c18930
annotation not available (200 aa)
   
          0.699
cya1
annotation not available (674 aa)
   
          0.698
NGR_c19390
annotation not available (165 aa)
   
          0.679
NGR_c19370
annotation not available (374 aa)
   
          0.673
NGR_c18920
annotation not available (536 aa)
   
          0.670
motD
annotation not available (493 aa)
   
          0.665
NGR_c03650
annotation not available (985 aa)
   
          0.655
NGR_c18010
annotation not available (173 aa)
   
          0.638
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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