STRINGSTRING
NGR_c27880 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c27880" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c27880annotation not available (287 aa)    
Predicted Functional Partners:
sqdB
annotation not available (406 aa)
 
     
  0.984
NGR_c27890
annotation not available (333 aa)
 
     
  0.977
NGR_c31180
annotation not available (304 aa)
   
        0.739
glgB
1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily (736 aa)
     
 
  0.697
NGR_c10110
annotation not available (399 aa)
   
 
  0.641
NGR_c27860
annotation not available (150 aa)
              0.587
lpsB
annotation not available (351 aa)
     
 
  0.573
lpsE
annotation not available (337 aa)
     
 
  0.573
lpsD
annotation not available (343 aa)
     
 
  0.573
wbgA
Uncharacterized protein y4gI; y4gI; NGR234_124 (909 aa)
     
 
  0.573
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
Server load: low (12%) [HD]