STRINGSTRING
NGR_c27960 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c27960" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c27960annotation not available (279 aa)    
Predicted Functional Partners:
NGR_c27950
annotation not available (248 aa)
   
   
  0.568
NGR_c27980
annotation not available (385 aa)
              0.517
mexF
annotation not available (1058 aa)
              0.517
NGR_c14290
annotation not available (135 aa)
   
        0.504
NGR_c07600
annotation not available (143 aa)
   
          0.480
NGR_c17210
annotation not available (88 aa)
   
          0.479
NGR_c13280
annotation not available (86 aa)
   
          0.472
NGR_c25820
annotation not available (266 aa)
   
          0.411
NGR_c07450
annotation not available (140 aa)
   
          0.406
NGR_c27060
annotation not available (337 aa)
   
          0.402
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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