STRINGSTRING
NGR_c28220 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c28220" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c28220annotation not available (368 aa)    
Predicted Functional Partners:
NGR_c28210
annotation not available (343 aa)
 
          0.974
NGR_c28200
annotation not available (549 aa)
              0.646
NGR_c14190
annotation not available (359 aa)
       
 
  0.551
suhB
annotation not available (266 aa)
              0.548
cysG
Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme (486 aa)
           
  0.534
NGR_c09520
annotation not available (154 aa)
   
 
      0.518
NGR_c20610
annotation not available (76 aa)
   
          0.516
NGR_c01700
annotation not available (1227 aa)
     
 
  0.499
NGR_c28370
annotation not available (264 aa)
 
          0.487
NGR_c12450
annotation not available (145 aa)
   
          0.476
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
Server load: low (10%) [HD]