STRINGSTRING
NGR_c28390 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c28390" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c28390annotation not available (88 aa)    
Predicted Functional Partners:
NGR_c20590
annotation not available (170 aa)
   
     
  0.793
NGR_c33340
annotation not available (233 aa)
   
     
  0.748
rpsU
annotation not available (70 aa)
   
          0.737
NGR_c33830
annotation not available (1189 aa)
   
          0.723
NGR_c36650
annotation not available (230 aa)
   
          0.711
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (276 aa)
   
          0.689
NGR_c34960
annotation not available (215 aa)
   
          0.688
NGR_c33840
annotation not available (1059 aa)
   
          0.639
NGR_c09050
annotation not available (149 aa)
   
          0.638
NGR_c28380
annotation not available (101 aa)
              0.614
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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