STRINGSTRING
NGR_c28400 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c28400" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c28400annotation not available (620 aa)    
Predicted Functional Partners:
NGR_c22830
annotation not available (213 aa)
 
        0.674
NGR_c34830
annotation not available (355 aa)
   
          0.670
NGR_c16550
annotation not available (308 aa)
   
          0.609
NGR_c12630
annotation not available (333 aa)
   
          0.586
NGR_c16540
annotation not available (495 aa)
   
          0.565
NGR_c07630
annotation not available (116 aa)
   
          0.521
NGR_c05440
annotation not available (182 aa)
   
          0.507
NGR_c17040
annotation not available (630 aa)
 
          0.502
NGR_c09560
annotation not available (442 aa)
 
          0.500
NGR_c28410
annotation not available (514 aa)
              0.488
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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