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NGR_c30070 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c30070" - Putative secretion protein Type I in Sinorhizobium fredii NGR234
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c30070Putative secretion protein Type I; HlyD family (445 aa)    
Predicted Functional Partners:
NGR_c30060
annotation not available (776 aa)
   
  0.988
NGR_c30050
annotation not available (667 aa)
 
          0.954
NGR_c30040
annotation not available (565 aa)
 
          0.823
NGR_c30030
annotation not available (175 aa)
 
          0.821
tolC
annotation not available (456 aa)
   
 
  0.818
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (647 aa)
   
 
  0.741
NGR_c30080
TPR repeat-containing protein; Similar to cellulose biosynthesis protein (414 aa)
 
 
 
  0.582
NGR_c11490
annotation not available (419 aa)
 
   
  0.551
NGR_c27300
annotation not available (607 aa)
 
   
  0.524
NGR_c23240
Uncharacterized protein; Similar to hemolysin-type calcium-binding repeat (1049 aa)
 
   
  0.520
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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