STRINGSTRING
fdsD protein (Sinorhizobium fredii NGR234) - STRING interaction network
"fdsD" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdsDannotation not available (77 aa)    
Predicted Functional Partners:
fdsA
annotation not available (959 aa)
 
   
  0.991
fdsB
annotation not available (518 aa)
 
   
  0.967
fdsG
annotation not available (159 aa)
 
   
  0.965
fdhD
Sulfur carrier protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH (301 aa)
 
     
  0.932
fdhA1
annotation not available (395 aa)
         
  0.900
purU3
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) (294 aa)
         
    0.900
NGR_c20480
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde (277 aa)
         
    0.900
purU4
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) (294 aa)
         
    0.900
NGR_c12250
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde (277 aa)
         
    0.900
NGR_c30910
annotation not available (298 aa)
 
          0.836
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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