STRINGSTRING
NGR_c31760 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c31760" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c31760annotation not available (465 aa)    
Predicted Functional Partners:
ctpA
annotation not available (440 aa)
   
        0.892
ftsX
annotation not available (315 aa)
 
 
 
  0.843
NGR_c31780
annotation not available (401 aa)
   
      0.737
NGR_c11140
annotation not available (438 aa)
 
     
  0.648
NGR_c00500
annotation not available (85 aa)
   
          0.603
NGR_c07690
annotation not available (195 aa)
   
          0.600
nudH
RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5’-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage (175 aa)
     
 
  0.599
rlmH
Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family (160 aa)
              0.572
NGR_c32640
annotation not available (503 aa)
   
          0.556
NGR_c05650
annotation not available (302 aa)
   
          0.537
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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