STRINGSTRING
NGR_c33850 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c33850" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c33850annotation not available (243 aa)    
Predicted Functional Partners:
NGR_c33860
annotation not available (501 aa)
 
 
  0.990
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation (324 aa)
         
  0.902
NGR_c33840
annotation not available (1059 aa)
              0.890
NGR_c33870
annotation not available (827 aa)
     
      0.889
NGR_c33830
annotation not available (1189 aa)
         
  0.883
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family (469 aa)
         
  0.815
trxA
annotation not available (107 aa)
         
  0.726
wbgA
Uncharacterized protein y4gI; y4gI; NGR234_124 (909 aa)
   
 
  0.719
NGR_c24400
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3’ and C5’positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose; Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family (177 aa)
   
 
  0.647
NGR_a03520
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3’ and C5’positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose (195 aa)
   
 
  0.647
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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