STRINGSTRING
NGR_c33900 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c33900" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c33900annotation not available (133 aa)    
Predicted Functional Partners:
NGR_c33890
annotation not available (96 aa)
 
  0.992
noeK
Phosphomannomutase; noeK; NGR234_9; Belongs to the phosphohexose mutase family (474 aa)
       
  0.907
NGR_c30500
Putative sugar kinase/putative transcriptional regulator; ROK family protein yajF (298 aa)
   
 
  0.822
NGR_c01160
annotation not available (308 aa)
       
  0.804
NGR_c33910
annotation not available (152 aa)
 
     
  0.774
NGR_c00150
annotation not available (154 aa)
 
   
  0.745
NGR_c33920
annotation not available (595 aa)
 
          0.674
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (483 aa)
              0.611
pstP
annotation not available (755 aa)
   
     
  0.547
rpoN
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is responsible for the expression of the nitrogen fixation genes (nif operon), glnA and dctA for dicarboxylate transport. The open complex (sigma-54 and core RNA polymerase) serves as the receptor for receipt of the melting signal from the remotely bound activator proteins NifA, NtrC, or DctD for the expression of the regulated proteins (519 aa)
 
 
 
  0.500
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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