STRINGSTRING
aatA2 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"aatA2" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aatA2annotation not available (429 aa)    
Predicted Functional Partners:
gltB1
annotation not available (1574 aa)
   
  0.938
pheA
annotation not available (284 aa)
 
 
  0.928
NGR_c30010
annotation not available (372 aa)
     
 
  0.918
lysC
annotation not available (424 aa)
 
  0.917
cysK2
annotation not available (346 aa)
   
 
  0.917
cysK1
annotation not available (366 aa)
   
 
  0.917
sseA
annotation not available (287 aa)
     
 
  0.914
NGR_c31300
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (321 aa)
   
 
  0.914
argG
annotation not available (525 aa)
     
  0.913
metC
annotation not available (395 aa)
     
 
  0.910
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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