STRINGSTRING
cpaF2 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"cpaF2" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpaF2annotation not available (465 aa)    
Predicted Functional Partners:
tadC1
annotation not available (327 aa)
 
   
  0.966
NGR_c34710
annotation not available (336 aa)
 
   
  0.936
cpaE1
annotation not available (427 aa)
 
   
  0.935
cpaC1
annotation not available (515 aa)
 
   
  0.924
cpaB1
annotation not available (271 aa)
 
   
  0.919
capA1
annotation not available (174 aa)
 
   
  0.805
pilA1
annotation not available (60 aa)
 
     
  0.781
cpaD
annotation not available (234 aa)
 
     
  0.774
rhcC2
Uncharacterized protein y4xJ; Involved in the secretion of an unknown compound (423 aa)
 
   
  0.754
pilQ1
Component of type IV pilus PilQ1; PilQ (141 aa)
 
   
  0.691
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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