STRINGSTRING
cysK1 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"cysK1" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysK1annotation not available (366 aa)    
Predicted Functional Partners:
cysE
annotation not available (275 aa)
 
  0.988
metC
annotation not available (395 aa)
  0.948
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide (394 aa)
  0.942
NGR_c13070
annotation not available (557 aa)
   
 
  0.941
aatA3
annotation not available (400 aa)
   
 
  0.918
aatA2
annotation not available (429 aa)
   
 
  0.917
attA1
annotation not available (410 aa)
     
 
  0.906
metH
annotation not available (1256 aa)
   
 
  0.906
NGR_c10280
annotation not available (427 aa)
 
  0.878
NGR_c21870
annotation not available (427 aa)
  0.878
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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