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NGR_c36980 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c36980" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c36980annotation not available (327 aa)    
Predicted Functional Partners:
ugdH
UDP-glucose 6-dehydrogenase; UDP-Glc dehydrogenase; UDP-GlcDH; UDPGDH; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family (437 aa)
   
  0.925
NGR_c02350
annotation not available (385 aa)
   
 
  0.914
exoN
annotation not available (295 aa)
       
  0.909
sqdB
annotation not available (406 aa)
         
    0.900
galE
annotation not available (344 aa)
   
0.845
NGR_c36970
annotation not available (174 aa)
 
          0.813
NGR_c36940
annotation not available (230 aa)
 
          0.538
NGR_a02760
Uncharacterized protein y4kT; y4kT; NGR234_207 (516 aa)
 
 
  0.485
nopM
Probable E3 ubiquitin-protein ligase NGR_a03640; Effector proteins function to alter host cell physiology and promote bacterial survival in host tissues. This protein is an E3 ubiquitin ligase that interferes with host’s ubiquitination pathway (By similarity) (546 aa)
   
      0.483
wbgA
Uncharacterized protein y4gI; y4gI; NGR234_124 (909 aa)
   
 
  0.468
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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