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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolDPutative ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. (230 aa)    
Predicted Functional Partners:
DB31_0178
Hypothetical protein.
 0.943
DB31_1885
ABC-type transport system, involved in lipoprotein release, permease component.
 0.942
DB31_6606
Cell division protein FtsX.
 0.918
DB31_6605
Cell division protein FtsX.
 0.910
DB31_0104
Hypothetical protein.
 
 0.867
DB31_0065
Hypothetical protein.
 
 0.825
DB31_6169
ABC transporter, permease protein.
 
 0.807
DB31_0105
Hypothetical protein.
 
 0.795
DB31_2581
Hypothetical protein.
  
    0.788
DB31_2576
BatE.
       0.787
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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