node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABI65616.1 | fusA | Mmar10_1324 | Mmar10_1798 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: ccr:CC1847 ATP-dependent RNA helicase, DEAD/DEAH box family; Belongs to the DEAD box helicase family. | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | 0.811 |
ABI65616.1 | pnp | Mmar10_1324 | Mmar10_3050 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: ccr:CC1847 ATP-dependent RNA helicase, DEAD/DEAH box family; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.896 |
ABI65616.1 | rho | Mmar10_1324 | Mmar10_2970 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: ccr:CC1847 ATP-dependent RNA helicase, DEAD/DEAH box family; Belongs to the DEAD box helicase family. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.532 |
ABI65616.1 | rplC | Mmar10_1324 | Mmar10_1795 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: ccr:CC1847 ATP-dependent RNA helicase, DEAD/DEAH box family; Belongs to the DEAD box helicase family. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.798 |
ABI65616.1 | rpoB | Mmar10_1324 | Mmar10_1802 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: ccr:CC1847 ATP-dependent RNA helicase, DEAD/DEAH box family; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.543 |
ABI65616.1 | rpsD | Mmar10_1324 | Mmar10_1016 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: ccr:CC1847 ATP-dependent RNA helicase, DEAD/DEAH box family; Belongs to the DEAD box helicase family. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.629 |
ABI65616.1 | rpsO | Mmar10_1324 | Mmar10_3049 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: ccr:CC1847 ATP-dependent RNA helicase, DEAD/DEAH box family; Belongs to the DEAD box helicase family. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.524 |
ABI65616.1 | truB | Mmar10_1324 | Mmar10_3048 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: ccr:CC1847 ATP-dependent RNA helicase, DEAD/DEAH box family; Belongs to the DEAD box helicase family. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.452 |
ABI65643.1 | fusA | Mmar10_1351 | Mmar10_1798 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: nar:Saro_0237 DEAD/DEAH box helicase-like. | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | 0.811 |
ABI65643.1 | pnp | Mmar10_1351 | Mmar10_3050 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: nar:Saro_0237 DEAD/DEAH box helicase-like. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.907 |
ABI65643.1 | rho | Mmar10_1351 | Mmar10_2970 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: nar:Saro_0237 DEAD/DEAH box helicase-like. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.526 |
ABI65643.1 | rplC | Mmar10_1351 | Mmar10_1795 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: nar:Saro_0237 DEAD/DEAH box helicase-like. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.798 |
ABI65643.1 | rpoB | Mmar10_1351 | Mmar10_1802 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: nar:Saro_0237 DEAD/DEAH box helicase-like. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.543 |
ABI65643.1 | rpsD | Mmar10_1351 | Mmar10_1016 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: nar:Saro_0237 DEAD/DEAH box helicase-like. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.629 |
ABI65643.1 | rpsO | Mmar10_1351 | Mmar10_3049 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: nar:Saro_0237 DEAD/DEAH box helicase-like. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.524 |
ABI65643.1 | truB | Mmar10_1351 | Mmar10_3048 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: nar:Saro_0237 DEAD/DEAH box helicase-like. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.452 |
fusA | ABI65616.1 | Mmar10_1798 | Mmar10_1324 | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: ccr:CC1847 ATP-dependent RNA helicase, DEAD/DEAH box family; Belongs to the DEAD box helicase family. | 0.811 |
fusA | ABI65643.1 | Mmar10_1798 | Mmar10_1351 | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: nar:Saro_0237 DEAD/DEAH box helicase-like. | 0.811 |
fusA | nusA | Mmar10_1798 | Mmar10_3041 | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.939 |
fusA | pnp | Mmar10_1798 | Mmar10_3050 | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.918 |