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rplS protein (Clostridium cellulolyticum) - STRING interaction network
"rplS" - 50S ribosomal protein L19 in Clostridium cellulolyticum
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second shell of interactors
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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rplS50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (116 aa)    
Predicted Functional Partners:
rpsP
PFAM- ribosomal protein S16; KEGG- cth-Cthe_0769 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family (81 aa)
 
 
  0.999
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (103 aa)
   
 
  0.999
rplE
50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs (180 aa)
   
 
  0.999
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (144 aa)
 
 
  0.999
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center (183 aa)
   
 
  0.999
rpsI
PFAM- ribosomal protein S9; KEGG- cth-Cthe_1782 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family (130 aa)
 
 
  0.999
rpsB
PFAM- ribosomal protein S2; KEGG- cth-Cthe_1006 SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family (252 aa)
 
 
  0.999
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (117 aa)
 
 
  0.999
rplV
50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome (158 aa)
   
 
  0.999
rpsG
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA (156 aa)
   
 
  0.999
Your Current Organism:
Clostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: C. cellulolyticum H10, Clostridium cellulolyticum, Clostridium cellulolyticum H10, Clostridium cellulolyticum str. H10, Clostridium cellulolyticum strain H10
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