STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
katGCatalase/peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (728 aa)    
Predicted Functional Partners:
aspC
COG1448: Aspartate/tyrosine/aromatic aminotransferase, Ralstonia solanacearum; KEGG, K00813.
     
 0.955
tyrB
COG1448: Aspartate/tyrosine/aromatic aminotransferase, Escherichia coli K12; KEGG, K00832.
     
 0.955
hisC
COG0079: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase, Pseudomonas aeruginosa; KEGG, K00817; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
 0.953
hisC-2
COG0079: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase, Ralstonia solanacearum; KEGG, K00817; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
 0.953
BAG42045.1
Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
    
 0.841
sod
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
 0.680
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
    
 0.629
ahpF
COG3634: Alkyl hydroperoxide reductase, large subunit, Pseudomonas aeruginosa; KEGG, K03387.
  
  
 0.602
BAG42486.1
COG0334: Glutamate dehydrogenase/leucine dehydrogenase, Ralstonia solanacearum; KEGG, K00261; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.595
trxA
Thioredoxin 1; COG0526: Thiol-disulfide isomerase and thioredoxins, Ralstonia solanacearum; KEGG, K03671; Belongs to the thioredoxin family.
    
 
 0.580
Your Current Organism:
Burkholderia multivorans
NCBI taxonomy Id: 395019
Other names: B. multivorans ATCC 17616, Burkholderia multivorans ATCC 17616, Burkholderia multivorans str. ATCC 17616, Burkholderia multivorans strain ATCC 17616
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