STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
astBSuccinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). (446 aa)    
Predicted Functional Partners:
astA
COG3138: Arginine/ornithine N-succinyltransferase beta subunit, Pseudomonas aeruginosa; KEGG, K00673.
 
 
 0.999
astA-2
COG3138: Arginine/ornithine N-succinyltransferase beta subunit, Escherichia coli O157:H7; KEGG, K00673.
 
 
 0.999
argD
COG4992: Ornithine/acetylornithine aminotransferase, Escherichia coli K12; KEGG, K00818; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
 
 
 0.997
astE
Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily.
 
  
 0.997
astD
Succinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
 
    0.951
BAG46345.1
COG2902: NAD-specific glutamate dehydrogenase, Pseudomonas aeruginosa.
 
    0.868
argD-2
COG4992: Ornithine/acetylornithine aminotransferase, Ralstonia solanacearum; KEGG, K00818; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
  
 
 0.779
putA
1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
   
 0.506
BAG43066.1
COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain, Escherichia coli O157:H7; KEGG, K02030; Belongs to the bacterial solute-binding protein 3 family.
       0.448
aotO
Putative succinylglutamate desuccinylase/aspartoacylase; COG3608: Predicted deacylase, Pseudomonas aeruginosa; KEGG, K06987.
 
    0.446
Your Current Organism:
Burkholderia multivorans
NCBI taxonomy Id: 395019
Other names: B. multivorans ATCC 17616, Burkholderia multivorans ATCC 17616, Burkholderia multivorans str. ATCC 17616, Burkholderia multivorans strain ATCC 17616
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