STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpsTSmall subunit ribosomal protein S20; Binds directly to 16S ribosomal RNA. (90 aa)    
Predicted Functional Partners:
rplU
Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
  
 
 0.999
rpmA
COG0211: Ribosomal protein L27, Ralstonia solanacearum; KEGG, K02899; Belongs to the bacterial ribosomal protein bL27 family.
  
 
 0.999
rplM
Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
 
 0.999
rpsI
COG0103: Ribosomal protein S9, Ralstonia solanacearum; KEGG, K02996; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.999
rpsP
COG0228: Ribosomal protein S16, Ralstonia solanacearum; KEGG, K02959; Belongs to the bacterial ribosomal protein bS16 family.
  
 
 0.999
rpmF
COG0333: Ribosomal protein L32, Ralstonia solanacearum; KEGG, K02911; Belongs to the bacterial ribosomal protein bL32 family.
   
 
 0.999
rpmE
COG0254: Ribosomal protein L31, Ralstonia solanacearum; KEGG, K02909.
  
 
 0.999
rpsR
Small subunit ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.
  
 
 0.999
rpsB
COG0052: Ribosomal protein S2, Ralstonia solanacearum; KEGG, K02967; Belongs to the universal ribosomal protein uS2 family.
  
 
 0.999
rpsO
Small subunit ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.
  
 
 0.999
Your Current Organism:
Burkholderia multivorans
NCBI taxonomy Id: 395019
Other names: B. multivorans ATCC 17616, Burkholderia multivorans ATCC 17616, Burkholderia multivorans str. ATCC 17616, Burkholderia multivorans strain ATCC 17616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.