STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bmul_2930TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: bur:Bcep18194_A3559 hypothetical protein (171 aa)    
Predicted Functional Partners:
Bmul_2929
TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: bvi:Bcep1808_0461 protein of unknown function DUF877
 
 0.991
Bmul_2928
Uncharacterized protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: bvi:Bcep1808_0462 protein of unknown function DUF796
 
 
 0.969
Bmul_3908
TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: bur:Bcep18194_B0981 protein of unknown function DUF877
 
 0.945
Bmul_2927
Uncharacterized protein; TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: bch:Bcen2424_0470 protein of unknown function DUF1316
 
  
 0.921
Bmul_2925
TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: bvi:Bcep1808_0465 protein of unknown function DUF1305
 
  
 0.909
Bmul_2923
TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein; KEGG: bam:Bamb_0388 ImpA domain protein
 
  
 0.889
Bmul_3909
Uncharacterized protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: bur:Bcep18194_B0982 protein of unknown function DUF796
 
 
 0.889
Bmul_2926
TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: bur:Bcep18194_A3563 protein of unknown function DUF879
 
  
 0.878
Bmul_2931
Putative lipoprotein; PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: bvi:Bcep1808_0459 tetratricopeptide TPR_2 repeat protein
 
   
 0.877
Bmul_2922
TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: bch:Bcen2424_0475 rhs element Vgr protein
 
  
 0.862
Your Current Organism:
Burkholderia multivorans
NCBI taxonomy Id: 395019
Other names: B. multivorans ATCC 17616, Burkholderia multivorans, Burkholderia multivorans ATCC 17616, Burkholderia multivorans ATCC17616, Burkholderia multivorans str. ATCC 17616, Burkholderia multivorans strain ATCC 17616
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