STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI53766.1PFAM: Glutathione S-transferase domain; KEGG: ret:RHE_CH00825 glutathione S-transferase protein; Belongs to the GST superfamily. (236 aa)    
Predicted Functional Partners:
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.579
ACI53765.1
PFAM: DoxX family protein; KEGG: ret:RHE_CH00824 hypothetical conserved membrane protein.
  
    0.551
lysS
TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: rec:RHECIAT_CH0003928 lysyl-tRNA synthetase protein; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 0.526
ACI55499.1
PFAM: NADPH-dependent FMN reductase; KEGG: ret:RHE_CH02065 putative oxidoreductase protein.
  
    0.522
ACI55240.1
PFAM: Glutathione S-transferase domain; KEGG: ret:RHE_CH02320 glutathione S-transferase protein.
  
  
 0.518
ACI55160.1
TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rec:RHECIAT_CH0002337 formaldehyde dehydrogenase (glutathione)/alcohol dehydrogenase protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
   
 0.461
ACI55447.1
PFAM: protein of unknown function DUF924; KEGG: rec:RHECIAT_CH0002626 hypothetical protein.
  
     0.452
ACI57088.1
PFAM: Glutathione S-transferase domain; KEGG: ret:RHE_CH04014 glutathione S-transferase protein.
 
  
 0.450
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.431
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
   0.423
Your Current Organism:
Rhizobium leguminosarum
NCBI taxonomy Id: 395492
Other names: R. leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii str. WSM2304, Rhizobium leguminosarum bv. trifolii strain WSM2304
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.