STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI53797.1PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: rec:RHECIAT_CH0000941 probable gluconolactonase protein. (295 aa)    
Predicted Functional Partners:
ACI53799.1
2-dehydro-3-deoxygalactonokinase; PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: rec:RHECIAT_CH0000943 2-dehydro-3-deoxygalactonokinase protein.
 
   
 0.923
ACI53798.1
PFAM: KDPG and KHG aldolase; KEGG: ret:RHE_CH00853 2-dehydro-3-deoxy-6-phosphogalactonate aldolase.
 
   
 0.890
ACI53800.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rec:RHECIAT_CH0000944 3-oxoacyl-[acyl-carrier-protein] reductase protein.
 
  
 0.819
ACI53801.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: rec:RHECIAT_CH0000945 putative transcriptional regulator protein, IclR family.
      0.581
ACI54366.1
Galactose 1-dehydrogenase; PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rec:RHECIAT_CH0001526 D-galactose-1-dehydrogenase protein.
 
  
 0.581
ACI56261.1
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: rec:RHECIAT_CH0003488 mannose-1-phosphate guanylyltransferase (GDP) protein; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein.
 
  
 0.501
ACI53796.1
PFAM: PRC-barrel domain protein; KEGG: rec:RHECIAT_CH0000940 hypothetical protein.
       0.434
ACI56746.1
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ret:RHE_CH03697 galactonate dehydratase protein.
 
   
 0.410
Your Current Organism:
Rhizobium leguminosarum
NCBI taxonomy Id: 395492
Other names: R. leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii str. WSM2304, Rhizobium leguminosarum bv. trifolii strain WSM2304
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