STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI55186.1PFAM: aminotransferase class V; KEGG: rec:RHECIAT_CH0002363 cysteine desulfurase protein (nitrogenase cofactor synthesis protein). (388 aa)    
Predicted Functional Partners:
ACI55133.1
PFAM: nitrogen-fixing NifU domain protein; KEGG: rec:RHECIAT_CH0002288 nitrogen fixation protein.
  
 0.999
ACI56868.1
PFAM: SirA family protein; KEGG: rec:RHECIAT_CH0004101 hypothetical protein; Belongs to the sulfur carrier protein TusA family.
   
 0.993
ACI55258.1
PFAM: ferredoxin; KEGG: ret:RHE_CH02338 ferredoxin, 2Fe-2S FDII electron transport iron-sulfur protein.
 
 0.967
ACI55179.1
TIGRFAM: FeS assembly scaffold SufA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rec:RHECIAT_CH0002356 hypothetical protein; Belongs to the HesB/IscA family.
 
  
 0.930
ACI54730.1
PFAM: Rhodanese domain protein; KEGG: ret:RHE_CH01773 thiosulfate sulfurtransferase protein.
  
 0.922
ACI57353.1
PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: rec:RHECIAT_CH0000177 molydopterin synthase sulfurylase protein.
 
 
 0.864
ACI54067.1
TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: ret:RHE_CH01133 putative transcriptional regulator protein.
 
  
 0.860
ACI56378.1
TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rec:RHECIAT_CH0003609 putative transcriptional regulator protein.
 
  
 0.860
ACI53327.1
Scaffold protein Nfu/NifU; PFAM: nitrogen-fixing NifU domain protein; Scaffold protein Nfu/NifU; KEGG: ret:RHE_CH00381 nitrogen fixation protein.
 
 
 0.792
ACI55879.1
PFAM: heat shock protein DnaJ domain protein; KEGG: rec:RHECIAT_CH0003012 molecular chaperone protein, DnaJ family.
  
 
 0.776
Your Current Organism:
Rhizobium leguminosarum
NCBI taxonomy Id: 395492
Other names: R. leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii str. WSM2304, Rhizobium leguminosarum bv. trifolii strain WSM2304
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