STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI55579.1Protein serine/threonine phosphatase; PFAM: histidine kinase HAMP region domain protein; Cache domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rec:RHECIAT_CH0002776 putative transcriptional regulator protein. (786 aa)    
Predicted Functional Partners:
ACI55581.1
KEGG: ret:RHE_CH02650 hypothetical protein.
 
     0.952
ACI55580.1
KEGG: rec:RHECIAT_CH0002777 hypothetical protein.
 
     0.950
ACI55578.1
Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rec:RHECIAT_CH0002775 probable menaquinone biosynthesis methyltransferase protein.
 
    0.941
ACI53647.1
KEGG: ret:RHE_CH00689 hypothetical protein.
   
    0.920
ACI53595.1
KEGG: rec:RHECIAT_CH0000714 chemotaxis protein CheX.
  
 
 0.847
ACI56533.1
KEGG: rec:RHECIAT_CH0003773 hypothetical protein.
  
 
 0.847
ACI53611.1
PFAM: surface presentation of antigens (SPOA) protein; KEGG: rec:RHECIAT_CH0000730 flagellar C-ring motor switch protein.
  
    0.816
ACI54090.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: rec:RHECIAT_CH0001244 putative sensory box/GGDEF family protein.
 
  
 0.814
ACI55259.1
PFAM: Hpt domain protein; KEGG: rec:RHECIAT_CH0002437 hypothetical protein.
  
  
 0.792
ACI55577.1
KEGG: rec:RHECIAT_CH0002774 hypothetical protein.
       0.791
Your Current Organism:
Rhizobium leguminosarum
NCBI taxonomy Id: 395492
Other names: R. leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii str. WSM2304, Rhizobium leguminosarum bv. trifolii strain WSM2304
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