STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI56928.1PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ret:RHE_PE00096 putative galactonate dehydratase protein. (387 aa)    
Predicted Functional Partners:
ACI53799.1
2-dehydro-3-deoxygalactonokinase; PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: rec:RHECIAT_CH0000943 2-dehydro-3-deoxygalactonokinase protein.
 
 
 0.946
ACI56934.1
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: mlo:mll2323 hypothetical protein.
 
  
 
0.940
ACI56746.1
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ret:RHE_CH03697 galactonate dehydratase protein.
  
  
 
0.916
ACI56927.1
PFAM: Dimethylmenaquinone methyltransferase; KEGG: ret:RHE_PE00095 hypothetical protein.
 
  
 0.845
ACI56931.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr2327 permease protein of sugar ABC transporter.
 
     0.698
ACI56929.1
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PE00097 probable sugar ABC transporter, ATP-binding protein.
       0.661
ACI56930.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PE00098 probable sugar ABC transporter, permease protein.
       0.656
ACI56932.1
PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_PE00100 probable sugar ABC transporter, substrate-binding protein.
 
     0.585
ACI56926.1
PFAM: cytochrome B561; KEGG: rec:RHECIAT_CH0004163 probable cytochrome b561 protein.
       0.542
ACI53798.1
PFAM: KDPG and KHG aldolase; KEGG: ret:RHE_CH00853 2-dehydro-3-deoxy-6-phosphogalactonate aldolase.
 
   
 0.541
Your Current Organism:
Rhizobium leguminosarum
NCBI taxonomy Id: 395492
Other names: R. leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii str. WSM2304, Rhizobium leguminosarum bv. trifolii strain WSM2304
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