STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mgsAMethylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. (126 aa)    
Predicted Functional Partners:
ACI56059.1
PFAM: Polynucleotide adenylyltransferase region; KEGG: rec:RHECIAT_CH0003209 poly(A) polymerase protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
  
 0.866
dapB-2
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
  
    0.824
glk
Glucokinase; KEGG: rec:RHECIAT_CH0000216 glucokinase protein; TIGRFAM: glucokinase; PFAM: Glucokinase; Belongs to the bacterial glucokinase family.
     
 0.769
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
  
    0.682
ACI57393.1
PFAM: peptidase U6 penicillin-insensitive murein endopeptidase; KEGG: ret:RHE_CH00174 penicillin-insensitive murein endopeptidase.
       0.581
gpmA
Phosphoglycerate mutase 1 family; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
     
 0.533
ACI57390.1
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0000215 putative multidrug ABC transporter, ATPase and permease protein.
       0.475
ACI53715.1
PFAM: LmbE family protein; KEGG: rec:RHECIAT_CH0000841 hypothetical protein.
  
  
 0.450
ACI54569.1
TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: ret:RHE_CH01619 biotin--[acetyl-CoA carboxylase] synthetase protein.
  
  
 0.419
ACI56110.1
PFAM: PfkB domain protein; KEGG: rec:RHECIAT_CH0003261 2-dehydro-3-deoxygluconokinase protein.
     0.402
Your Current Organism:
Rhizobium leguminosarum
NCBI taxonomy Id: 395492
Other names: R. leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii str. WSM2304, Rhizobium leguminosarum bv. trifolii strain WSM2304
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