Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Galf_1062 | Galf_1329 | Galf_1062 | Galf_1329 | KEGG: slt:Slit_0591 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein. | PFAM: Spermine synthase; KEGG: psa:PST_3134 spermidine synthase. | 0.647 |
Galf_1327 | Galf_1329 | Galf_1327 | Galf_1329 | TIGRFAM: alpha-glucan phosphorylase; KEGG: nmu:Nmul_A0715 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35. | PFAM: Spermine synthase; KEGG: psa:PST_3134 spermidine synthase. | 0.518 |
Galf_1327 | glgA | Galf_1327 | Galf_1328 | TIGRFAM: alpha-glucan phosphorylase; KEGG: nmu:Nmul_A0715 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35. | Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.941 |
Galf_1329 | Galf_1062 | Galf_1329 | Galf_1062 | PFAM: Spermine synthase; KEGG: psa:PST_3134 spermidine synthase. | KEGG: slt:Slit_0591 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein. | 0.647 |
Galf_1329 | Galf_1327 | Galf_1329 | Galf_1327 | PFAM: Spermine synthase; KEGG: psa:PST_3134 spermidine synthase. | TIGRFAM: alpha-glucan phosphorylase; KEGG: nmu:Nmul_A0715 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35. | 0.518 |
Galf_1329 | argA | Galf_1329 | Galf_0127 | PFAM: Spermine synthase; KEGG: psa:PST_3134 spermidine synthase. | TIGRFAM: amino-acid N-acetyltransferase; KEGG: slt:Slit_2948 amino-acid N-acetyltransferase; PFAM: aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily. | 0.414 |
Galf_1329 | fusA | Galf_1329 | Galf_0555 | PFAM: Spermine synthase; KEGG: psa:PST_3134 spermidine synthase. | Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...] | 0.410 |
Galf_1329 | glgA | Galf_1329 | Galf_1328 | PFAM: Spermine synthase; KEGG: psa:PST_3134 spermidine synthase. | Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.613 |
argA | Galf_1329 | Galf_0127 | Galf_1329 | TIGRFAM: amino-acid N-acetyltransferase; KEGG: slt:Slit_2948 amino-acid N-acetyltransferase; PFAM: aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily. | PFAM: Spermine synthase; KEGG: psa:PST_3134 spermidine synthase. | 0.414 |
fusA | Galf_1329 | Galf_0555 | Galf_1329 | Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...] | PFAM: Spermine synthase; KEGG: psa:PST_3134 spermidine synthase. | 0.410 |
glgA | Galf_1327 | Galf_1328 | Galf_1327 | Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | TIGRFAM: alpha-glucan phosphorylase; KEGG: nmu:Nmul_A0715 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35. | 0.941 |
glgA | Galf_1329 | Galf_1328 | Galf_1329 | Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | PFAM: Spermine synthase; KEGG: psa:PST_3134 spermidine synthase. | 0.613 |