STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcho_0706PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: mpt:Mpe_A2706 hypothetical protein. (304 aa)    
Predicted Functional Partners:
Lcho_0707
SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mpt:Mpe_A2707 putative protein kinase.
 
 
 0.946
Lcho_4231
PFAM: cyclic nucleotide-binding; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mpt:Mpe_A0154 serine/threonine-protein kinase.
 
 0.846
Lcho_1648
TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: ajs:Ajs_2096 dihydrolipoamide dehydrogenase.
  
 0.844
Lcho_4059
SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: azo:azo3888 putative serine/threonine kinase.
 
 
 0.841
Lcho_2939
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mpt:Mpe_A2951 serine/threonine protein kinase-like protein.
 
 
 0.833
Lcho_4066
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: azo:azo3908 putative serine/threonine protein kinase.
 
 
 0.833
Lcho_0193
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mpt:Mpe_A0069 putative serine/threonine protein kinase.
 
 
 0.832
Lcho_0191
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: mpt:Mpe_A0067 hypothetical protein.
 
 
 0.760
Lcho_2804
Serine/threonine protein kinase; PFAM: Metal-dependent hydrolase HDOD; SMART: serine/threonine protein kinase; KEGG: mpt:Mpe_A2971 serine/threonine protein kinase-like protein.
 
 
 0.723
Lcho_0911
PFAM: UspA domain protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mpt:Mpe_A3032 putative serine/threonine kinase.
 
 
 0.716
Your Current Organism:
Leptothrix cholodnii
NCBI taxonomy Id: 395495
Other names: L. cholodnii SP-6, Leptothrix cholodnii SP-6, Leptothrix cholodnii str. SP-6, Leptothrix cholodnii strain SP-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.