STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL42808.1PFAM: FAD dependent oxidoreductase; KEGG: npu:Npun_F3745 FAD dependent oxidoreductase. (561 aa)    
Predicted Functional Partners:
ACL44339.1
KEGG: amr:AM1_5425 lycopene cyclase.
  
 
 0.916
ACL44091.1
PFAM: FAD dependent oxidoreductase; KEGG: ter:Tery_0494 FAD dependent oxidoreductase.
  
 
 0.908
ACL43394.1
PFAM: fatty acid desaturase; KEGG: tel:tlr1900 beta-carotene hydroxylase.
     
 0.902
ACL47522.1
PFAM: fatty acid desaturase; KEGG: npu:Npun_F4798 fatty acid desaturase.
     
 0.900
ACL46502.1
PFAM: Squalene/phytoene synthase; KEGG: amr:AM1_4825 phytoene synthase.
 
  
 0.682
ACL44867.1
PFAM: protein of unknown function DUF422; KEGG: tel:tlr0414 hypothetical protein.
 
   
 0.582
ACL47126.1
PFAM: Squalene/phytoene synthase; KEGG: tel:tll1096 farnesyl-diphosphate farnesyltransferase.
  
  
 0.560
ACL43185.1
Magnesium chelatase ATPase subunit D; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
  
 0.494
ACL45225.1
Beta-ketoacyl synthase; PFAM: Thioesterase; Enoyl-CoA hydratase/isomerase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: npu:Npun_CR073 KR.
  
  
 0.457
ACL46829.1
PFAM: protein of unknown function DUF608; KEGG: npu:Npun_R1544 hypothetical protein.
  
     0.408
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.