STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL42857.1Ribosomal protein PSRP-3/Ycf65; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family. (109 aa)    
Predicted Functional Partners:
ACL43703.1
KEGG: ana:all0216 hypothetical protein.
  
     0.774
ACL47557.1
KEGG: tel:tll0601 probable ribonuclease P.
  
     0.771
ACL42733.1
KEGG: tel:tlr1402 hypothetical protein.
  
     0.770
ACL46601.1
KEGG: ter:Tery_1164 hypothetical protein.
  
     0.765
ACL46616.1
PFAM: PRC-barrel domain protein; KEGG: amr:AM1_2015 PRC-barrel domain-containing protein.
  
     0.764
ACL42645.1
KEGG: cyt:cce_3658 hypothetical protein.
  
     0.763
ACL47004.1
KEGG: ana:asr2994 hypothetical protein.
  
     0.761
ACL44959.1
PFAM: photosystem II oxygen evolving complex protein PsbP; KEGG: tel:tlr2075 similar to photosystem II oxygen-evolving complex 23K protein PsbP.
  
     0.758
ACL42995.1
KEGG: tel:tll1052 hypothetical protein.
  
     0.757
ndhN
NADH dehydrogenase I subunit N, putative; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.756
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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