STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL43196.1Putative PAS/PAC sensor protein; KEGG: tel:tlr1120 ABC transporter substrate-binding protein; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; protein phosphatase 2C domain protein. (840 aa)    
Predicted Functional Partners:
ACL44619.1
TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: amr:AM1_0862 UreA/branched-chain amino acid ABC transporter, permease protein, putative; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.970
ACL44620.1
TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: ava:Ava_4362 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.969
ACL44617.1
KEGG: tel:tlr1124 probable branched chain ABC transporter ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.965
ACL44618.1
KEGG: syp:SYNPCC7002_A0395 branched chain amino acid ABC transporter ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.957
ACL44621.1
TIGRFAM: urea ABC transporter, urea binding protein; PFAM: Extracellular ligand-binding receptor; KEGG: tel:tlr1120 ABC transporter substrate-binding protein.
  
  
 
0.906
ACL45389.1
Putative PAS/PAC sensor protein; KEGG: met:M446_1053 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
 
 0.852
ACL45595.1
KEGG: npu:Npun_F2908 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
 
 0.803
ACL46090.1
KEGG: npu:Npun_R3572 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
 
 0.803
ACL46096.1
KEGG: npu:Npun_R2035 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
 
 0.803
ACL43195.1
KEGG: syn:slr1658 hypothetical protein.
       0.773
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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