STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL43642.1KEGG: amr:AM1_3910 hypothetical protein. (350 aa)    
Predicted Functional Partners:
ACL43643.1
KEGG: amr:AM1_3909 hypothetical protein.
       0.588
ACL43834.1
PFAM: 5'-Nucleotidase domain protein; KEGG: cya:CYA_1059 5'-nucleotidase family protein; Belongs to the 5'-nucleotidase family.
  
 
 0.518
ACL42883.1
PFAM: protein of unknown function DUF255; KEGG: amr:AM1_1172 hypothetical protein.
    
   0.485
ACL43641.1
PFAM: Thioredoxin domain; KEGG: amr:AM1_2923 thiol:disulfide interchange protein TxlA.
       0.473
ACL45225.1
Beta-ketoacyl synthase; PFAM: Thioesterase; Enoyl-CoA hydratase/isomerase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: npu:Npun_CR073 KR.
  
 
 0.418
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.